Information for 15-KATGAATATTCA (Motif 14)

A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T G A T C C G T A C G A T T G C A
p-value:1e-18
log p-value:-4.295e+01
Information Content per bp:1.816
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif142.4
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets110.3 +/- 47.6bp
Average Position of motif in Background94.1 +/- 69.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--KATGAATATTCA-
CTCATGAATATTCAT
 A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.87
Offset:1
Orientation:forward strand
Alignment:KATGAATATTCA
-ATGAATATTC-
 A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.86
Offset:1
Orientation:forward strand
Alignment:KATGAATATTCA
-ATGMATATDC-
 A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-KATGAATATTCA--
AYATGYATATGCATR
 A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PH0148.1_Pou3f3/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----KATGAATATTCA-
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Arid5a/MA0602.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--KATGAATATTCA
NNTNNCAATATTAG
 A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--KATGAATATTCA
NNTNNCAATATTAG
 A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.64
Offset:5
Orientation:forward strand
Alignment:KATGAATATTCA-------
-----ACATTCATGACACG
 A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0198.1_Zfp128_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--KATGAATATTCA
NNTATANATATACN
 A C G T A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KATGAATATTCA
ATATGCAAATNNN
 A C G T A C G T G C T A A C G T C T A G G T C A C G T A A C G T C G T A A C G T A C G T A G T C C G T A
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A