Information for 19-TTYACGSA (Motif 15)

G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A
Reverse Opposite:
A C G T A T G C A G T C T C A G A C G T T C G A G T C A C T G A
p-value:1e-18
log p-value:-4.212e+01
Information Content per bp:1.697
Number of Target Sequences with motif324.0
Percentage of Target Sequences with motif8.05%
Number of Background Sequences with motif2096.9
Percentage of Background Sequences with motif4.79%
Average Position of motif in Targets99.9 +/- 55.4bp
Average Position of motif in Background103.3 +/- 66.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTYACGSA-
TBGCACGCAA
 A C G T G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PAX6/MA0069.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTYACGSA------
TTCACGCATGAGTT
 G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

HOXA9/MA0594.2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTYACGSA
NNTTTACGAC
 A C G T A C G T G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TTYACGSA
--CACGCA
 G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTYACGSA-
TTTTATGGCB
 A C G T G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A A C G T
G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C

GMEB2/MA0862.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTYACGSA-
-TTACGTAA
 G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A A C G T
A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

Gmeb1/MA0615.1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTYACGSA------
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTYACGSA------
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTYACGSA-
DGWTTTATGRCN
 A C G T A C G T A C G T G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTYACGSA----
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C G T G A C T A C G T A G C T C G T A A G T C A C T G A T C G G T C A A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A