Information for 19-AWTAATTAWTWA (Motif 18)

C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A
Reverse Opposite:
A G C T G C A T T C G A G C T A A G C T G C T A C T G A G C A T G C A T C T G A C G T A A G C T
p-value:1e-15
log p-value:-3.582e+01
Information Content per bp:1.739
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets96.2 +/- 31.2bp
Average Position of motif in Background79.1 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.82
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0080.1_Hoxd8/Jaspar

Match Rank:1
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----AWTAATTAWTWA
NAGCCATTAATTANTTA
 A C G T A C G T A C G T A C G T A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0070.1_Hoxc5/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---AWTAATTAWTWA--
CGAATTAATTAATTACT
 A C G T A C G T A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A A C G T A C G T
T A G C T A C G G T C A T C G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T G C A T T G C A G A C T G C A T

PH0019.1_Dbx2/Jaspar

Match Rank:3
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--AWTAATTAWTWA--
NAATTAATTAATTNNN
 A C G T A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A A C G T A C G T
C A T G C G T A T G C A G C A T G A C T G T C A G C T A G A C T G C A T C T G A C G T A G C A T C A G T C T G A G T C A T C G A

PH0142.1_Pou1f1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-AWTAATTAWTWA----
GATTAATTAATTAAGTC
 A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A A C G T A C G T A C G T A C G T
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

PH0091.1_Lhx1/Jaspar

Match Rank:5
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---AWTAATTAWTWA--
CGAATTAATTAATAATG
 A C G T A C G T A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A A C G T A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0132.1_Pax6/Jaspar

Match Rank:6
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----AWTAATTAWTWA
GNNAATTAATTAATCA
 A C G T A C G T A C G T A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A

PH0146.1_Pou3f1/Jaspar

Match Rank:7
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--AWTAATTAWTWA---
NANTTAATTAATTANNN
 A C G T A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PH0172.1_Tlx2/Jaspar

Match Rank:8
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--AWTAATTAWTWA---
TAATTAATTAATAACTA
 A C G T A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A A C G T A C G T A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T

PH0018.1_Dbx1/Jaspar

Match Rank:9
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--AWTAATTAWTWA---
TAATTAATTAATAATTA
 A C G T A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A A C G T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

Lhx3/MA0135.1/Jaspar

Match Rank:10
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-AWTAATTAWTWA
GATTAATTAATTT
 A C G T C T G A G C A T A G C T C G T A C G T A A G C T C G A T C T G A C G A T A G C T C G T A T C G A
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T