Information for 6-TAWAATTAGM (Motif 3)

G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
Reverse Opposite:
C A T G A T G C G A C T G T C A C G T A C G A T C G A T G C T A G C A T C T G A
p-value:1e-88
log p-value:-2.038e+02
Information Content per bp:1.645
Number of Target Sequences with motif1244.0
Percentage of Target Sequences with motif30.91%
Number of Background Sequences with motif7824.2
Percentage of Background Sequences with motif17.89%
Average Position of motif in Targets101.0 +/- 55.3bp
Average Position of motif in Background100.8 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TAWAATTAGM
KCCAAAAATAGC
 A C G T A C G T G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

VSX2/MA0726.1/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:TAWAATTAGM
-NTAATTAG-
 G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

ARGFX/MA1463.1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TAWAATTAGM
TTTAATTAGN
 G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
C A G T G A C T G A C T C T G A C G T A A C G T C A G T C T G A C T A G G T C A

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:4
Score:0.84
Offset:2
Orientation:forward strand
Alignment:TAWAATTAGM
--TAATTAGN
 G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
A C G T A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAWAATTAGM
DCYAAAAATAGM
 A C G T A C G T G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

LBX1/MA0618.1/Jaspar

Match Rank:6
Score:0.83
Offset:1
Orientation:forward strand
Alignment:TAWAATTAGM
-TTAATTAG-
 G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T

VSX1/MA0725.1/Jaspar

Match Rank:7
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TAWAATTAGM
-NTAATTAG-
 G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T

PRRX2/MA0075.3/Jaspar

Match Rank:8
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TAWAATTAGM
-NTAATTAG-
 G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
A C G T G A C T A G C T C G T A C G T A A C G T A C G T T C G A T C A G A C G T

LHX9/MA0701.2/Jaspar

Match Rank:9
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TAWAATTAGM
-NTAATTAG-
 G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
A C G T A G C T A G C T G T C A C G T A A C G T C A G T C T G A T C A G A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TAWAATTAGM
GCTAAAAATAGC
 A C G T A C G T G A C T C G T A C G A T C G T A G C T A C G A T C A G T C T G A T A C G G T A C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C