Information for 8-ATGCAGACTG (Motif 4)

G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G
Reverse Opposite:
T G A C G T C A C A T G A G C T G T A C C G A T A C T G T G A C G C T A C G A T
p-value:1e-66
log p-value:-1.541e+02
Information Content per bp:1.533
Number of Target Sequences with motif1862.0
Percentage of Target Sequences with motif46.26%
Number of Background Sequences with motif14457.5
Percentage of Background Sequences with motif33.05%
Average Position of motif in Targets97.6 +/- 55.2bp
Average Position of motif in Background100.0 +/- 70.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGACTG
ATATGCAAATT-
 A C G T A C G T G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATGCAGACTG
--CCAGACAG
 G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATGCAGACTG--
--CCAGACRSVB
 G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATGCAGACTG
--BCAGACWA
 G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATGCAGACTG-
-TGCTGACTCA
 G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFG/MA0659.2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATGCAGACTG
NAAAAATGCTGACTC
 A C G T A C G T A C G T A C G T A C G T G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G
C G T A C T G A C T G A C G T A C G T A G C T A G C A T C T A G T G A C G C A T C A T G G C T A A T G C G C A T G A T C

MAFF/MA0495.3/Jaspar

Match Rank:7
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------ATGCAGACTG
NNNAAAATGCTGACTN
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G
C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C A T T C A G G T A C G C A T C A T G G C T A A T G C G C A T G A C T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATGCAGACTG
TAAAAATGCTGACTT
 A C G T A C G T A C G T A C G T A C G T G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G
C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ATGCAGACTG--
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATGCAGACTG
AAAATGCTGACT-
 A C G T A C G T A C G T G C T A C G A T A C T G T G A C G C T A C A T G T C G A G T A C C A G T A C T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T