Information for 10-AGTGTGAAAT (Motif 5)

C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
Reverse Opposite:
G C T A G C A T G A C T C G A T G A T C G T C A A T G C C G T A A G T C G C A T
p-value:1e-44
log p-value:-1.032e+02
Information Content per bp:1.532
Number of Target Sequences with motif1931.0
Percentage of Target Sequences with motif47.98%
Number of Background Sequences with motif16205.4
Percentage of Background Sequences with motif37.05%
Average Position of motif in Targets100.3 +/- 56.1bp
Average Position of motif in Background100.2 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAAAT
AGGTGTGAAA-
 A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----AGTGTGAAAT--
GAAAAGGTGTGAAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAAAT
AGGTGTGAAA-
 A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAAAT-
AAGGTGTGAAAAT
 A C G T A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAAAT
AAGGTGTGAAA-
 A C G T A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGTGTGAAAT
AGGTGTGAAM-
 A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T

TBX18/MA1565.1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AGTGTGAAAT
GGAGGTGTGAAA-
 A C G T A C G T A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAAAT
AAGGTGTGAA--
 A C G T A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAAAT
TAGGTGTGAAG-
 A C G T A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGTGTGAAAT
AAGGTGTKAA--
 A C G T A C G T C G T A T A C G G C A T T A C G C A G T C T A G G C T A C T G A C G T A C G A T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T