Information for 12-CCACTAGATGGC (Motif 9)

G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C
Reverse Opposite:
T C A G T G A C G T A C G T C A A G C T A G T C A C G T C T G A A C T G G C A T A C T G A C T G
p-value:1e-23
log p-value:-5.388e+01
Information Content per bp:1.781
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif33.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets112.7 +/- 43.2bp
Average Position of motif in Background96.6 +/- 72.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGATGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGATGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGATGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCACTAGATGGC
--AACAGATGGC
 G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

CTCFL/MA1102.2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCACTAGATGGC--
--AGCAGGGGGCGC
 G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCACTAGATGGC---
---CAAGATGGCGGC
 G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NEUROD1/MA1109.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCACTAGATGGC--
-GGACAGATGGCAG
 G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C A C G T A C G T
A C G T C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCACTAGATGGC---
---CAAGATGGCGGC
 G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Isl1/MA1608.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGATGGC
ATCCATTAGCA---
 A C G T A C G T G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A A C G T A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCACTAGATGGC-
GGAACAGATGGCA
 G T A C A G T C C G T A A G T C G A C T C G T A C T A G C T G A C A G T A C T G A C T G A G T C A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A