Information for 14-TTTCACAG (Motif 10)

C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G
Reverse Opposite:
A T G C C G A T A C T G A C G T T A C G C G T A T C G A C G T A
p-value:1e-87
log p-value:-2.017e+02
Information Content per bp:1.827
Number of Target Sequences with motif2487.0
Percentage of Target Sequences with motif17.57%
Number of Background Sequences with motif4059.7
Percentage of Background Sequences with motif11.84%
Average Position of motif in Targets99.3 +/- 56.3bp
Average Position of motif in Background102.6 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TTTCACAG--
TTTCACACCT
 C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T A C G T
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TTTCACAG------
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBR1/MA0802.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TTTCACAG--
TTTCACACCT
 C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T A C G T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TTTCACAG-
HTTTCCCASG
 A C G T C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TTTCACAG-
-TTGACAGC
 C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTTCACAG---
TTTCACACCTN
 C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T A C G T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:TTTCACAG---
-TTMACACCTT
 C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T A C G T A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TTTCACAG---
NTTTTCACACCTT
 A C G T A C G T C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTTCACAG--
KTTCACACCT
 C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

RBPJ/MA1116.1/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTTCACAG-
NNTTCCCANN
 A C G T C G A T A G C T A C G T A T G C T G C A T G A C C G T A T A C G A C G T
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G