Information for 13-TTAAAATGCA (Motif 12)

A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A
Reverse Opposite:
G C A T T A C G G T A C C G T A A C G T A G C T G A C T G A C T C T G A T G C A
p-value:1e-74
log p-value:-1.718e+02
Information Content per bp:1.646
Number of Target Sequences with motif3731.0
Percentage of Target Sequences with motif26.36%
Number of Background Sequences with motif6852.0
Percentage of Background Sequences with motif19.98%
Average Position of motif in Targets99.4 +/- 56.2bp
Average Position of motif in Background100.9 +/- 66.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TTAAAATGCA---
GAAAAAATTGCAAGG
 A C G T A C G T A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTAAAATGCA
NATTCAAAT---
 A C G T A C G T A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTAAAATGCA---
CTTTGTTATGCAAAT
 A C G T A C G T A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A A C G T A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

POU5F1/MA1115.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTAAAATGCA----
---ATATGCAAATT
 A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TTAAAATGCA
TAGGTAATAAAATTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTAAAATGCA---
CATTGTTATGCAAAT
 A C G T A C G T A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A A C G T A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTAAAATGCA
-TTAAGTGC-
 A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------TTAAAATGCA-
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

Arid3b/MA0601.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTAAAATGCA
NTAATTAATAT---
 A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTAAAATGCA
CGGTTTCAAA----
 A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T G A T C G A T G C A G C A T C A T G A T G C C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T