Information for 19-AAMAGCGC (Motif 13)

C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C
Reverse Opposite:
C A T G G T A C A C T G T A G C G C A T C A T G G A C T G C A T
p-value:1e-43
log p-value:-9.998e+01
Information Content per bp:1.531
Number of Target Sequences with motif2226.0
Percentage of Target Sequences with motif15.73%
Number of Background Sequences with motif4046.0
Percentage of Background Sequences with motif11.80%
Average Position of motif in Targets99.0 +/- 56.4bp
Average Position of motif in Background100.4 +/- 74.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rhox11/MA0629.1/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------AAMAGCGC---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------AAMAGCGC---
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------AAMAGCGC---
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAMAGCGC-----
ATAAAGGCGCGCGAT
 A C G T A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

ZNF341/MA1655.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAMAGCGC-
GGGAACAGCCAC
 A C G T A C G T A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAMAGCGC-----
ATAAGGGCGCGCGAT
 A C G T A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

E2F2/MA0864.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAMAGCGC------
NNAATGGCGCCAAAAC
 A C G T A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A G C T A C G T A C A G T A T C G A T C G G A T C A C T G A T G C A T G C G C T A G C T A G C T A G C T A A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAMAGCGC
--CAGCC-
 C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

E2F4/MA0470.2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAMAGCGC-----
NAATGGCGCCAAAA
 A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAMAGCGC-------
CCTTCGGCGCCAAAAGG
 A C G T A C G T C G T A C T G A G T A C C G T A A T C G T G A C C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G