Information for 16-TGMATWATKCAK (Motif 16)

C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T
Reverse Opposite:
G T C A C A G T C A T G G T C A C G T A C G A T C G A T G C T A G C A T A C G T G A T C G C T A
p-value:1e-32
log p-value:-7.574e+01
Information Content per bp:1.595
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets84.1 +/- 50.8bp
Average Position of motif in Background125.1 +/- 55.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:TGMATWATKCAK
TGAATTATGCAT
 C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---TGMATWATKCAK
TCATGAATWATTCAT
 A C G T A C G T A C G T C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

POU4F1/MA0790.1/Jaspar

Match Rank:3
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TGMATWATKCAK-
ATGAATAATTAATG
 A C G T C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TGMATWATKCAK--
ATGCATWATGCATRW
 A C G T C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T A C G T A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

POU4F3/MA0791.1/Jaspar

Match Rank:5
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TGMATWATKCAK---
ATGCATAATTAATGAG
 A C G T C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

POU4F2/MA0683.1/Jaspar

Match Rank:6
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGMATWATKCAK---
ATGCATAATTAATGAG
 A C G T C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T A C G T A C G T A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------TGMATWATKCAK
AAAATATGCATAATAAA-
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGMATWATKCAK
--GAATATTCAT
 C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T
A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

HNF1A/MA0046.2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGMATWATKCAK-
NGTTAATNATTAACN
 A C G T A C G T C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T A C G T
C G T A C A T G A G C T G C A T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G A T C G A C T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGMATWATKCAK
GTTAATNATTAA-
 A C G T C G A T C T A G T G C A C G T A C G A T G C T A G C T A G C A T C A G T G T A C G T C A C A G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A A C G T