Information for 1-TAATTAGC (Motif 1)

G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
Reverse Opposite:
A T C G A T G C G C A T G T C A C G T A A G C T C A G T C G T A
p-value:1e-314
log p-value:-7.244e+02
Information Content per bp:1.620
Number of Target Sequences with motif9605.0
Percentage of Target Sequences with motif21.40%
Number of Background Sequences with motif6498.7
Percentage of Background Sequences with motif14.71%
Average Position of motif in Targets99.5 +/- 55.9bp
Average Position of motif in Background100.0 +/- 62.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:TAATTAGC
TAATTAGN
 G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C

PRRX2/MA0075.3/Jaspar

Match Rank:2
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGC
NTAATTAG-
 A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
G A C T A G C T C G T A C G T A A C G T A C G T T C G A T C A G A C G T

VSX2/MA0726.1/Jaspar

Match Rank:3
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGC
NTAATTAG-
 A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

LHX9/MA0701.2/Jaspar

Match Rank:4
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGC
NTAATTAG-
 A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
A G C T A G C T G T C A C G T A A C G T C A G T C T G A T C A G A C G T

LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGC-
CTAATTAGCN
 A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C A C G T
A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G A T G C T A C G

VSX1/MA0725.1/Jaspar

Match Rank:6
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGC
NTAATTAG-
 A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T

EMX2/MA0886.1/Jaspar

Match Rank:7
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--TAATTAGC
NCTAATTANN
 A C G T A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C

En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer

Match Rank:8
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-TAATTAGC-
STAATTAGHN
 A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C A C G T
A T G C G A C T T G C A T C G A G C A T A C G T C T G A T A C G G A T C A G T C

NOTO/MA0710.1/Jaspar

Match Rank:9
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--TAATTAGC
NNTAATTAGN
 A C G T A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

MEOX1/MA0661.1/Jaspar

Match Rank:10
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--TAATTAGC
GNTAATTAGN
 A C G T A C G T G C A T G T C A T C G A G C A T C A G T C G T A T A C G T A G C
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C