Information for 14-RMGCGATT (Motif 12)

T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T
Reverse Opposite:
T G C A T G C A G C A T G T A C A T C G A T G C A C G T A G C T
p-value:1e-104
log p-value:-2.403e+02
Information Content per bp:1.413
Number of Target Sequences with motif9909.0
Percentage of Target Sequences with motif22.08%
Number of Background Sequences with motif7965.6
Percentage of Background Sequences with motif18.03%
Average Position of motif in Targets99.4 +/- 56.2bp
Average Position of motif in Background99.8 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX1/MA0711.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:RMGCGATT--
--CGGATTAN
 T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:RMGCGATT--
-ACCGATTAG
 T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PH0130.1_Otx2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--RMGCGATT-------
TGTAGGGATTAATTGTC
 A C G T A C G T T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---RMGCGATT------
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RMGCGATT-------
TGAAGGGATTAATCATC
 A C G T A C G T T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PITX2/MA1547.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:RMGCGATT--
--GGGATTAN
 T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RMGCGATT---
-NNGGATTAGN
 T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PH0044.1_Homez/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----RMGCGATT----
NNTAAAAACGATGTTNT
 A C G T A C G T A C G T A C G T A C G T T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RMGCGATT-------
TAGAGGGATTAAATTTC
 A C G T A C G T T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RMGCGATT-------
AGAGGGGATTAATTTAT
 A C G T A C G T T C G A T G C A T A C G T A G C C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T