Information for 17-SNTGCATAAT (Motif 14)

T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T
Reverse Opposite:
G C T A C A G T G C A T T G C A C G A T C A T G A G T C G C T A G A T C A T C G
p-value:1e-86
log p-value:-2.003e+02
Information Content per bp:1.536
Number of Target Sequences with motif2964.0
Percentage of Target Sequences with motif6.60%
Number of Background Sequences with motif2002.3
Percentage of Background Sequences with motif4.53%
Average Position of motif in Targets99.6 +/- 56.1bp
Average Position of motif in Background100.5 +/- 64.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:SNTGCATAAT-
-ATGAATATTC
 T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----SNTGCATAAT---
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:SNTGCATAAT-
-ATGMATATDC
 T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:SNTGCATAAT---
-ATGCATAATTCA
 T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T A C G T A C G T
A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

HLF/MA0043.3/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--SNTGCATAAT--
NNGTTGCATAACNN
 A C G T A C G T T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T A C G T
G C A T C A G T T C A G G A C T C A G T C T A G G A T C T C G A G A C T G T C A C G T A A G T C G T C A G C T A

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-SNTGCATAAT----
WYATGCATWATGCAT
 A C G T T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T A C G T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-SNTGCATAAT----
TCATGAATWATTCAT
 A C G T T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T A C G T A C G T A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

POU4F1/MA0790.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:SNTGCATAAT-----
-ATGAATAATTAATG
 T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:SNTGCATAAT--
--TGATTGATGA
 T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T A C G T
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

POU4F2/MA0683.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:forward strand
Alignment:SNTGCATAAT-------
-ATGCATAATTAATGAG
 T A G C C T A G C G A T A C T G G T A C G C T A A C G T C G T A G T C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G