Information for 8-TTCCATGGAAAC (Motif 15)

G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C
Reverse Opposite:
C T A G A C G T G A C T C A G T A G T C A G T C C G T A C G A T C T A G C T A G G T C A C T G A
p-value:1e-81
log p-value:-1.887e+02
Information Content per bp:1.694
Number of Target Sequences with motif1030.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif524.8
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets101.6 +/- 56.7bp
Average Position of motif in Background96.0 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX3/MA0798.2/Jaspar

Match Rank:1
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TTCCATGGAAAC--
TNCCATAGCAACNN
 G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TTCCATGGAAAC-
TTGCCATGGCAACN
 A C G T G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

RFX1/MA0509.2/Jaspar

Match Rank:3
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TTCCATGGAAAC--
TNCCATAGCAACNN
 G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-TTCCATGGAAAC-
TTGCCATGGCAACC
 A C G T G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---TTCCATGGAAAC
KGTTGCCATGGCAAC
 A C G T A C G T A C G T G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:6
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TTCCATGGAAAC--
GTTGCCATGGCAACCG
 A C G T A C G T G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T A C G T
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

RFX5/MA0510.2/Jaspar

Match Rank:7
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---TTCCATGGAAAC-
NGTTGCCATGGCAACG
 A C G T A C G T A C G T G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

RFX2/MA0600.2/Jaspar

Match Rank:8
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TTCCATGGAAAC-
CGTTGCCATGGCAACG
 A C G T A C G T A C G T G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.81
Offset:0
Orientation:forward strand
Alignment:TTCCATGGAAAC---
TACCATAGCAACGGT
 G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.80
Offset:2
Orientation:forward strand
Alignment:TTCCATGGAAAC--
--SCCTAGCAACAG
 G A C T C A G T G A T C A G T C G C T A C G A T C T A G T C A G G T C A C T G A C G T A G A T C A C G T A C G T
A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G