Information for 1-MHNBYTGBCA (Motif 2)

T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A
Reverse Opposite:
C G A T T C A G T A G C A G T C C G T A C T A G T G C A G A C T C A T G A C T G
p-value:1e-303
log p-value:-6.997e+02
Information Content per bp:1.553
Number of Target Sequences with motif16538.0
Percentage of Target Sequences with motif36.85%
Number of Background Sequences with motif12677.7
Percentage of Background Sequences with motif28.69%
Average Position of motif in Targets100.8 +/- 55.5bp
Average Position of motif in Background99.9 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.90
Offset:3
Orientation:reverse strand
Alignment:MHNBYTGBCA-
---CTTGGCAA
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:MHNBYTGBCA
--ARNTGACA
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.86
Offset:4
Orientation:forward strand
Alignment:MHNBYTGBCA--
----YTGWCADY
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:MHNBYTGBCA--
---NTTGGCANN
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:5
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:MHNBYTGBCA
--VGCTGGCA
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A
A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.84
Offset:2
Orientation:forward strand
Alignment:MHNBYTGBCA--
--VGCTGWCAVB
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A A C G T A C G T
A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.83
Offset:4
Orientation:reverse strand
Alignment:MHNBYTGBCA-
----NTGTCAN
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:MHNBYTGBCA-
---CCTGTCAA
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:MHNBYTGBCA--
--NNTTGGCANN
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:MHNBYTGBCA-
---GCTGTCAA
 T G A C G T A C C T G A A C G T G A T C A C G T A C T G A T C G A G T C C G T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A