Information for 22-CGGCGTTTAT (Motif 23)

T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T
Reverse Opposite:
T C G A C G A T T C G A T C G A C T G A G A T C T A C G T G A C G T A C A T C G
p-value:1e-39
log p-value:-9.181e+01
Information Content per bp:1.449
Number of Target Sequences with motif2488.0
Percentage of Target Sequences with motif5.54%
Number of Background Sequences with motif1866.9
Percentage of Background Sequences with motif4.23%
Average Position of motif in Targets100.8 +/- 56.0bp
Average Position of motif in Background99.4 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGCGTTTAT-
-ANCGTTTANN
 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

BARHL1/MA0877.2/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGGCGTTTAT
--NCGTTTAN
 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T
A C G T A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGTTTAT--
NNNNNNCTTTTATAN
 A C G T A C G T A C G T T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CGGCGTTTAT--
NNNNNNCTTTTATAN
 A C G T A C G T A C G T T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGGCGTTTAT----
--DGWTTTATGRCN
 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGGCGTTTAT----
--NTGTTTAYATWW
 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGGCGTTTAT---
---NTTTTATGAC
 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGCGTTTAT------
-GACTTTTAWTTTGAA
 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGGCGTTTAT--
---TGTTTATTT
 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGCGTTTAT---
-CBTGTTTAYAWW
 T A G C C A T G A C T G A T G C C T A G G A C T A G C T A G C T G C T A A G C T A C G T A C G T A C G T
A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T