Information for 18-AGCGAATAAATC (Motif 25)

C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C
Reverse Opposite:
A T C G C G T A C A G T A C G T A G C T C G T A G A C T A G C T T A G C C T A G A T G C A C G T
p-value:1e-27
log p-value:-6.365e+01
Information Content per bp:1.705
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.5 +/- 52.7bp
Average Position of motif in Background89.0 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGCGAATAAATC-
-GGCCATAAATCA
 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGCGAATAAATC----
-NNCCATAAATCATNN
 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

PBX2/MA1113.2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGCGAATAAATC---
--GTCATAAATCATT
 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C A C G T A C G T A C G T
A C G T A C G T T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

HOXA13/MA0650.2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCGAATAAATC
-CCCAATAAAAC
 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C
A C G T T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

HOXD13/MA0909.2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCGAATAAATC
-CCCAATAAAAC
 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C
A C G T T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCGAATAAATC---
--GTCATCAATCATT
 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C A C G T A C G T A C G T
A C G T A C G T C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

PH0124.1_Obox5_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCGAATAAATC--
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCGAATAAATC--
--NCYATMAATCAY
 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C A C G T A C G T
A C G T A C G T T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCGAATAAATC---
NTTGATTGAATCWGV
 C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C A C G T A C G T A C G T
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G

ZNF24/MA1124.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCGAATAAATC
GAATGAATGAATG
 A C G T C G T A T A C G G A T C A T C G T C G A C G T A G C A T C T G A T G C A G T C A G A C T T A G C
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G