Information for 19-CGCCACTGAATT (Motif 26)

A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T
Reverse Opposite:
C G T A C G T A C G A T A C G T A T G C C G T A A C T G A C G T A C T G A C T G G T A C A C T G
p-value:1e-26
log p-value:-6.086e+01
Information Content per bp:1.857
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.2 +/- 60.8bp
Average Position of motif in Background84.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGCCACTGAATT-
TAACCACTCAAGAA
 A C G T A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CGCCACTGAATT---
AATCGCACTGCATTCCG
 A C G T A C G T A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

NKX2-5/MA0063.2/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGCCACTGAATT
-ACCACTCAAAA
 A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T
A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGCCACTGAATT
-ACCACTTAA--
 A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGCCACTGAATT--
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGCCACTGAATT-
NANTTCATTGAATTA
 A C G T A C G T A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCCACTGAATT
AASCACTCAA--
 A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGCCACTGAATT
-NSCACTYVAV-
 A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCCACTGAATT
MRSCACTYAA--
 A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCCACTGAATT----
NNNTATTGAATTGNNN
 A G T C A C T G G T A C G T A C G T C A A G T C A C G T A T C G C G T A C G T A A C G T C G A T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T