Information for 21-AATCCTTTCGGA (Motif 28)

G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
Reverse Opposite:
G C A T A T G C G A T C T C A G T C G A T C G A C T G A C A T G A T C G G C T A G A C T C A G T
p-value:1e-14
log p-value:-3.444e+01
Information Content per bp:1.593
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets104.7 +/- 58.2bp
Average Position of motif in Background83.7 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AATCCTTTCGGA
NNCTAATCCCNN----
 A C G T A C G T A C G T A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T A C G T A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCTTTCGGA
GNNNATTAATCCCTNCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AATCCTTTCGGA
NYTAATCCYB-----
 A C G T A C G T A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AATCCTTTCGGA
CTAATCCTCTT---
 A C G T A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T

Ebf2/MA1604.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATCCTTTCGGA-
NNTCCCTTGGGAN
 G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A A C G T
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

PH0129.1_Otx1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCTTTCGGA
NNNAATTAATCCCCNCN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATCCTTTCGGA
TAATCCCN-----
 A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AATCCTTTCGGA
AATCGTTAATCCCTTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATCCTTTCGGA
CTAATCCC------
 A C G T A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------AATCCTTTCGGA
GANNATTAATCCCTNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A C G A T T A G C G T A C G A C T A G C T A G C T A G T C C T A G T A C G C G T A
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A A C G T A C G T