Information for 6-CGCTTTGC (Motif 5)

T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C
Reverse Opposite:
C T A G T G A C C T G A T G C A T C G A A T C G T G A C A T C G
p-value:1e-159
log p-value:-3.675e+02
Information Content per bp:1.574
Number of Target Sequences with motif20602.0
Percentage of Target Sequences with motif45.90%
Number of Background Sequences with motif17512.8
Percentage of Background Sequences with motif39.63%
Average Position of motif in Targets100.0 +/- 56.1bp
Average Position of motif in Background100.0 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGCTTTGC---
NNCTTTGTTNN
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

TCF7/MA0769.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGCTTTGC---
TCCTTTGATGT
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T A C G T
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGCTTTGC---
-CCTTTGATGT
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T A C G T
A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGCTTTGC---
-CCTTTGATST
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T A C G T
A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

SOX4/MA0867.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGCTTTGC--
NCCTTTGTTC
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGCTTTGC---
-YCTTTGTTCC
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGCTTTGC---
-CCTTTGTTTT
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTTGC-----
TNCCTTTGATCTTN
 A C G T T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCTTTGC---
-CCWTTGTYYB
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C A C G T A C G T A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCTTTGC
NGCTN---
 T A G C A C T G T A G C A G C T A C G T G A C T A C T G G A T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T