Information for 6-TTTGCACAGA (Motif 6)

G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A
Reverse Opposite:
C A G T A G T C A G C T T C A G C A G T A C T G G A T C G C T A T C G A C G T A
p-value:1e-134
log p-value:-3.097e+02
Information Content per bp:1.535
Number of Target Sequences with motif15082.0
Percentage of Target Sequences with motif33.61%
Number of Background Sequences with motif12486.7
Percentage of Background Sequences with motif28.26%
Average Position of motif in Targets100.3 +/- 55.4bp
Average Position of motif in Background100.1 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TTTGCACAGA
GATTTGCATA--
 A C G T A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TTTGCACAGA---
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTTGCACAGA---
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A A C G T A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

POU2F3/MA0627.2/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTTGCACAGA
NNATTTGCATATN
 A C G T A C G T A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCACAGA
ATTTGCATA--
 A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCACAGA
ATTTGCATAT-
 A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCACAGA
ATTTGCATA--
 A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTTGCACAGA
ATTTGCATAA-
 A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCACAGA-
TNTAATTTGCATACNA
 A C G T A C G T A C G T A C G T A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCACAGA-
TNTAATTTGCATANNN
 A C G T A C G T A C G T A C G T A C G T G C A T A G C T C G A T C A T G T G A C G T C A A G T C T C G A T C A G G T C A A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A