Information for 12-GSAGYSTG (Motif 9)

T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G
Reverse Opposite:
A G T C C G T A T A G C C T G A G T A C A C G T A T G C A G T C
p-value:1e-116
log p-value:-2.685e+02
Information Content per bp:1.674
Number of Target Sequences with motif12191.0
Percentage of Target Sequences with motif27.16%
Number of Background Sequences with motif9953.1
Percentage of Background Sequences with motif22.53%
Average Position of motif in Targets100.5 +/- 56.6bp
Average Position of motif in Background100.0 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GSAGYSTG
-AAGCTTG
 T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GSAGYSTG-
-TWGTCTGV
 T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL002.1_INR/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GSAGYSTG-
-NNNANTGA
 T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GSAGYSTG
--TGCGTG
 T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GSAGYSTG
-CAGCC--
 T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GSAGYSTG
NGAAGC---
 A C G T T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GSAGYSTG-
VBSYGTCTGG
 A C G T T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GSAGYSTG---
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PAX5/MA0014.3/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GSAGYSTG-----
-GAGCGTGACCCC
 T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GSAGYSTG-
-CTGTCTGG
 T C A G T A C G C G T A A C T G G A C T A T C G A C G T C T A G A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G