Information for 11-TGCATWATGC (Motif 14)

A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C
Reverse Opposite:
C A T G T G A C C G T A C G A T C G T A G T C A C G A T C T A G T G A C G T C A
p-value:1e-33
log p-value:-7.615e+01
Information Content per bp:1.629
Number of Target Sequences with motif1717.0
Percentage of Target Sequences with motif10.53%
Number of Background Sequences with motif2606.6
Percentage of Background Sequences with motif7.86%
Average Position of motif in Targets98.6 +/- 55.8bp
Average Position of motif in Background99.0 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TGCATWATGC--
WYATGCATWATGCAT
 A C G T A C G T A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCATWATGC-
ATGCATAATTCA
 A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C A C G T
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGCATWATGC--
TCATGAATWATTCAT
 A C G T A C G T A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C A C G T A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

POU4F1/MA0790.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCATWATGC--
CATTAATTATTCAT
 A C G T A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C A C G T A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCATWATGC
ATGAATATTC-
 A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TGCATWATGC-
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

POU4F3/MA0791.1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGCATWATGC--
CTCATTAATTATGCAT
 A C G T A C G T A C G T A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C A C G T A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCATWATGC-
-CCWTTGTYYB
 A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX13/MA1120.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCATWATGC
NNCCATTGTNN
 A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCATWATGC---
CAATGCATTGTGGGTA
 A C G T A C G T A C G T A C G T A C T G G A T C G C T A A C G T C G A T G C T A A C G T A C T G G T A C A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A