Information for 5-AGACTGTCATTT (Motif 15)

C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T
Reverse Opposite:
C G T A T C G A C T G A C A G T T A C G G T C A T A G C G C T A A C T G A C G T A G T C G C A T
p-value:1e-33
log p-value:-7.600e+01
Information Content per bp:1.509
Number of Target Sequences with motif3423.0
Percentage of Target Sequences with motif20.99%
Number of Background Sequences with motif5741.3
Percentage of Background Sequences with motif17.32%
Average Position of motif in Targets99.8 +/- 54.9bp
Average Position of motif in Background100.8 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGACTGTCATTT
---NTGTCAN--
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGACTGTCATTT
--CCTGTCAA--
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.65
Offset:4
Orientation:forward strand
Alignment:AGACTGTCATTT
----TGTCANYT
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGACTGTCATTT
--GCTGTCAA--
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGACTGTCATTT--
--ACTTTCGTTTCT
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T A C G T A C G T
A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGACTGTCATTT
---YTGWCADY-
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T
A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGACTGTCATTT
-VGCTGWCAVB-
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGACTGTCATTT--
TTGAATGAAATTCGA
 A C G T C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGACTGTCATTT
-TGCTGTGATTT
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGACTGTCATTT--
--NNTGACCTTTNN
 C G T A T C A G T G C A T G A C C G A T A T C G C A G T A T G C G C T A G A C T A G C T G C A T A C G T A C G T
A C G T A C G T G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A