Information for 1-GCCATCTGTTYN (Motif 2)

T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
Reverse Opposite:
T A C G C T A G T C G A T C G A A T G C C G T A A C T G C T G A C G A T A C T G A T C G A T G C
p-value:1e-87
log p-value:-2.006e+02
Information Content per bp:1.669
Number of Target Sequences with motif901.0
Percentage of Target Sequences with motif5.52%
Number of Background Sequences with motif884.2
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets97.8 +/- 54.6bp
Average Position of motif in Background103.8 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.98
Offset:-2
Orientation:reverse strand
Alignment:--GCCATCTGTTYN
NNNCCATCTGTNN-
 A C G T A C G T T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-GCCATCTGTTYN
NNCCATCTGTNNN
 A C G T T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GCCATCTGTTYN
GCCATCTGTT--
 T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GCCATCTGTTYN
ACCATCTGTT--
 T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GCCATCTGTTYN
RCCATMTGTT--
 T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:6
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GCCATCTGTTYN
NNCATCTGNN--
 T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----GCCATCTGTTYN-
CCNNACCATCTGGCCTN
 A C G T A C G T A C G T A C G T T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:8
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GCCATCTGTTYN
SMCATCTGKH--
 T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:9
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GCCATCTGTTYN
NNAACATCTGTNN-
 A C G T A C G T T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GCCATCTGTTYN
GCCAGCTGBTNB
 T A C G A T G C T G A C G C T A A G C T T G A C A C G T A T C G A G C T A G C T G A T C A T G C
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C