Information for 11-TTGTCACATACA (Motif 20)

G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
Reverse Opposite:
A C G T A T C G A C G T T C G A A C G T C T A G A C G T T A C G G C T A G A T C C G T A C G T A
p-value:1e-22
log p-value:-5.085e+01
Information Content per bp:1.850
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.1 +/- 49.3bp
Average Position of motif in Background84.6 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGTCACATACA
-TGTCANYT---
G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCACATACA
KTTCACACCT---
A C G T G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTGTCACATACA
AATTGATACATT--
A C G T A C G T G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGTCACATACA
NTGTCAN-----
G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTGTCACATACA
AATTGTTACATT--
A C G T A C G T G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGTCACATACA
CCTGTCAA-----
A C G T G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTGTCACATACA
TTVACACCTH--
G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTGTCACATACA
YTGWCADY----
G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTGTCACATACA
ATTAACACCT---
A C G T G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGTCACATACA
-TGACACCT---
G C A T C G A T C A T G C A G T A G T C C G T A A G T C G T C A A C G T G T C A A T G C C G T A
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T