Information for 12-AGATGCAAACGC (Motif 21)

C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
Reverse Opposite:
A T C G G A T C A C T G A G C T A C G T C A G T A T C G G A T C G T C A A C G T A G T C G A C T
p-value:1e-21
log p-value:-4.986e+01
Information Content per bp:1.700
Number of Target Sequences with motif341.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif392.5
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets103.5 +/- 55.8bp
Average Position of motif in Background92.8 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:AGATGCAAACGC
ATATGCAAATT-
 C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGATGCAAACGC
ATATGCAAAT--
 C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGATGCAAACGC-
ATATGCAAATNNN
 C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

POU2F3/MA0627.2/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGATGCAAACGC
AATATGCAAATAA
 A C G T C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGATGCAAACGC
TTATGCAAAT--
 C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGATGCAAACGC
AGATGCAATCCC
 C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGATGCAAACGC-
-TATGCWAATBAV
 C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGATGCAAACGC
-TATGCAAATC-
 C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGATGCAAACGC
AATATGCAAATT-
 A C G T C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGATGCAAACGC
-TATGCAAAT--
 C T G A T C A G T G C A C A G T C T A G T A G C G T C A T G C A T C G A T G A C C T A G T A G C
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T