Information for 17-GATTGAACTGTC (Motif 25)

A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C
Reverse Opposite:
T A C G C G T A G T A C C G T A C T A G A C G T A C G T A G T C C G T A C T G A A C G T A T G C
p-value:1e-19
log p-value:-4.603e+01
Information Content per bp:1.868
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets106.6 +/- 61.9bp
Average Position of motif in Background191.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GATTGAACTGTC
--ATGAACTTT-
 A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C
A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GATTGAACTGTC
--TTGAMCTTTG
 A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C
A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

PH0140.1_Pknox1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GATTGAACTGTC-----
-AAAGACCTGTCAATCC
 A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATTGAACTGTC-----
-AACGAGCTGTCAATAC
 A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATTGAACTGTC---
NNATTGGACTTTNGNN
 A C G T A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GATTGAACTGTC
NNANTGATTGATNNNN-
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C A C G T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATTGAACTGTC-----
-AAAGACCTGTCAATAC
 A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

VDR/MA0693.2/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GATTGAACTGTC
---TGAACTCA-
 A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GATTGAACTGTC-
---CCAACTGCCA
 A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PH0105.1_Meis3/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATTGAACTGTC-----
-AATTACCTGTCAATAC
 A T C G C G T A G A C T G A C T A C T G C G T A G T C A A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C