Information for 20-GAAACCCCTTGT (Motif 27)

T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T
Reverse Opposite:
T C G A T G A C G C T A C G T A C T A G C T A G C T A G T A C G G A C T A G C T A G C T A T G C
p-value:1e-18
log p-value:-4.360e+01
Information Content per bp:1.585
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets107.2 +/- 48.3bp
Average Position of motif in Background107.6 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAAACCCCTTGT
ACTGAAACCA-----
 A C G T A C G T A C G T T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GAAACCCCTTGT-
-----CCWTTGTY
 T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAACCCCTTGT
GGAAANCCCC---
 A C G T T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAAACCCCTTGT--
----NCCATTGTTC
 T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAAACCCCTTGT
GGAAATTCCC---
 A C G T T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAAACCCCTTGT
GGGAAATCCCCN--
 A C G T A C G T T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GAAACCCCTTGT---
-----CCWTTGTYYB
 T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAACCCCTTGT
AGGVNCCTTTGT
 T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

SOX4/MA0867.2/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAAACCCCTTGT--
----NCCTTTGTTC
 T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAAACCCCTTGT----
----BCCWTTGTBYKV
 T A C G T C G A T C G A C T G A A T G C G A T C G A T C G A T C G C A T C G A T A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G