Information for 23-CGACCGTCACAA (Motif 34)

A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A
Reverse Opposite:
A G C T A G C T A C T G A C G T A T C G T C G A A T G C C T A G A C T G A C G T A G T C A C T G
p-value:1e-14
log p-value:-3.449e+01
Information Content per bp:1.793
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets97.2 +/- 58.2bp
Average Position of motif in Background101.2 +/- 45.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGACCGTCACAA-
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGACCGTCACAA
CCAACTGCCA---
 A C G T A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGACCGTCACAA
--CCTGTCAA--
 A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CGACCGTCACAA---
-----GTCACATGAY
 A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGACCGTCACAA--
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGACCGTCACAA
--GCTGTCAA--
 A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGACCGTCACAA-
AATTACCTGTCAATAC
 A C G T A C G T A C G T A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGACCGTCACAA-
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGACCGTCACAA
---NTGTCAN--
 A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGACCGTCACAA-
ATGGAAACCGTTATTTT
 A C G T A C G T A C G T A C G T A G T C C T A G T G C A A G T C G A T C T A C G A C G T A T G C T G C A G T A C C T G A C T G A A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T