Information for 22-AGTCTATGCH (Motif 36)

C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
Reverse Opposite:
C G T A C A T G A G T C C G T A A G C T C G T A C T A G G T C A A T G C G A C T
p-value:1e-8
log p-value:-1.926e+01
Information Content per bp:1.764
Number of Target Sequences with motif176.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif224.0
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets103.0 +/- 56.0bp
Average Position of motif in Background98.4 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGTCTATGCH
TWGTCTGV---
 A C G T C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGTCTATGCH--
CGTCTACACGGG
 C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGTCTATGCH
VBSYGTCTGG---
 A C G T A C G T A C G T C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGTCTATGCH
RRTCAATA--
 C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTCTATGCH---
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGTCTATGCH
TGTCTAGA--
 C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTCTATGCH
CTGTCTGG---
 A C G T C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGTCTATGCH
CGTCTAGACA
 C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

ZSCAN4/MA1155.1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCTATGCH
TTTTCAGTGTGTGCA
 A C G T A C G T A C G T A C G T A C G T C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

SMAD5/MA1557.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTCTATGCH
TGTCTAGACA
 C T G A A T C G A C G T A G T C A C G T C T G A A C G T T C A G G T A C G C A T
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A