Information for 9-AGGCTTCY (Motif 8)

C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C
Reverse Opposite:
C T A G C T A G C T G A G C T A C T A G T A G C T A G C C G A T
p-value:1e-50
log p-value:-1.154e+02
Information Content per bp:1.799
Number of Target Sequences with motif6082.0
Percentage of Target Sequences with motif37.29%
Number of Background Sequences with motif10527.8
Percentage of Background Sequences with motif31.76%
Average Position of motif in Targets99.2 +/- 56.2bp
Average Position of motif in Background100.7 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTTCY
CNAGGCCT--
 A C G T A C G T C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTTCY
CTAGGCCT--
 A C G T A C G T C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGCTTCY
CAAGCTT--
 A C G T C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGGCTTCY
--GCTTCC
 C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTTCY--
TAAGGCGTCTTG
 A C G T A C G T C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

OSR2/MA1646.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGCTTCY----
NNGCTTCTGTNN
 C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C A C G T A C G T A C G T A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGCTTCY-
-GGCGCGCT
 C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C A C G T
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGGCTTCY
AGCCTCAGGCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGGCTTCY
-NGCTN--
 C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGGCTTCY
HAWGRGGCCM--
 A C G T A C G T A C G T A C G T C G T A A T C G A T C G G A T C C G A T A G C T G A T C A G T C
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T