Information for 6-GCGGTGTTTT (Motif 9)

T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T
Reverse Opposite:
C G T A C T G A T G C A C T G A T G A C T C G A T A G C G A T C A T C G A T G C
p-value:1e-48
log p-value:-1.116e+02
Information Content per bp:1.532
Number of Target Sequences with motif4664.0
Percentage of Target Sequences with motif28.60%
Number of Background Sequences with motif7821.3
Percentage of Background Sequences with motif23.60%
Average Position of motif in Targets99.1 +/- 55.8bp
Average Position of motif in Background99.9 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFI1/MA0038.2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCGGTGTTTT-
TGCAGTGATTTN
 A C G T T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T A C G T
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCGGTGTTTT
TGCTGTGATTT
 A C G T T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCGGTGTTTT
GCAGTGATTT
 T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCGGTGTTTT------
NNCTTTGTTTTGNTNNN
 A C G T T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCGGTGTTTT--
NNGTANTGTTTTNC
 A C G T A C G T T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

POL007.1_BREd/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCGGTGTTTT
---GTTTGTT
 T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T
A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCGGTGTTTT
GCTGTGGTTT
 T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCGGTGTTTT-
----TGTTTAC
 T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G A G C T G A C T C G A T C T G A A G T C

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCGGTGTTTT-
-NVWTGTTTAC
 T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T A C G T
A C G T A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCGGTGTTTT---
----TGTTTATTT
 T A C G T A G C C T A G A T C G A G C T A C T G G A C T A C G T G A C T G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T