Information for 1-KGRCACATTGGC (Motif 1)

A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C
Reverse Opposite:
A C T G T A G C A G T C G T C A C G T A C G A T T A C G C G A T A T C G A G T C A T G C T G C A
p-value:1e-17
log p-value:-3.983e+01
Information Content per bp:1.650
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif13.62%
Number of Background Sequences with motif1185.0
Percentage of Background Sequences with motif2.56%
Average Position of motif in Targets108.2 +/- 50.6bp
Average Position of motif in Background99.3 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:KGRCACATTGGC-
---CCGATTGGCT
 A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C A C G T
A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYB/MA0502.2/Jaspar

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:KGRCACATTGGC---
---CTCATTGGCCAG
 A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

NFYA/MA0060.3/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:KGRCACATTGGC-
--NCTGATTGGNN
 A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:KGRCACATTGGC---
------NTTGGCANN
 A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFYC/MA1644.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:KGRCACATTGGC-
--NCTGATTGGNN
 A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:KGRCACATTGGC
---CTCATTGTC
 A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:KGRCACATTGGC----
----TGATTGGCTANN
 A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:KGRCACATTGGC---
-----NNTTGGCANN
 A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

HNF4G/MA0484.2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-KGRCACATTGGC
NNTGGACTTTGNN
 A C G T A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

HNF4A/MA0114.4/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-KGRCACATTGGC
NNTGGACTTTGNN
 A C G T A C G T A T C G T C A G A T G C C G T A A T G C C G T A A C G T A C G T C T A G A T C G G T A C
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A