Information for 10-TTATTCATGA (Motif 17)

A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A
Reverse Opposite:
A C G T A T G C C G T A C G A T A C T G C G T A T C G A C G A T C G T A T G C A
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.830
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif361.1
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets92.2 +/- 52.4bp
Average Position of motif in Background99.1 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TTATTCATGA----
ACATTCATGACACG
 A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCATGA
GAATATTCAT--
 A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TTATTCATGA----
AGTTATTAATGAGGTC
 A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A A C G T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TTATTCATGA
GHATATKCAT--
 A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----TTATTCATGA
ATGAATWATTCATGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTATTCATGA-
ATGAATATTCATGAG
 A C G T A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTATTCATGA
NDATGASTCAYN-
 A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A
A C T G C A T G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A G A C T A G T C A C G T

FOSL1::JUNB/MA1137.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTATTCATGA
NNATGAGTCATNN
 A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A
C A T G A C G T T C G A G A C T C A T G G T C A T A C G G C A T G T A C C G T A A G C T G T A C C T G A

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTATTCATGA
TGTGACTCATT-
 A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTATTCATGA
NNATGASTCATH-
 A C G T A C G T A C G T A C G T C G A T C G T A A C G T A C G T A G T C C G T A C G A T T A C G C G T A
A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C A C G T