Information for 16-CYRTCMASTCCA (Motif 20)

A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A T C G A C G T A C T G A C T G C G T A A G T C C T A G A C T G
p-value:1e-8
log p-value:-2.032e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets75.8 +/- 61.3bp
Average Position of motif in Background115.4 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CYRTCMASTCCA---
-TAACCACTCAAGAA
 A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T A C G T A C G T
A C G T G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CYRTCMASTCCA-
---TRCATTCCAG
 A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A G C T C T A G T G A C C G T A A C G T C G A T A G T C A G T C C T G A C A T G

ZKSCAN5/MA1652.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CYRTCMASTCCA--
NNCTCACCTCCTNN
 A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CYRTCMASTCCA-
---NSCACTYVAV
 A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CYRTCMASTCCA-
-------ATCCAC
 A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

ZNF684/MA1600.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CYRTCMASTCCA---
ATACAGTCCACCCCTTTA
 A C G T A C G T A C G T A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T A C G T A C G T
C T G A A G C T T C G A A G T C C G T A A T C G A C G T T A G C G A T C C G T A A T G C T G A C A G T C A G T C G C A T G A C T C A G T T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CYRTCMASTCCA
GCTGTCAA-----
 A C G T A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CYRTCMASTCCA----
GGCAAAAGTCCAATAA
 A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CYRTCMASTCCA----
----SSAATCCACANN
 A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CYRTCMASTCCA-
--AGCCACTCAAG
 A G T C A G T C C T A G A C G T A G T C G T A C C G T A A T G C A C G T A G T C A G T C C G T A A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G