Information for 14-CGTCAAGATT (Motif 22)

A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A T G C A G C T C G A T A C T G C T G A G A T C C T A G
p-value:1e-8
log p-value:-1.866e+01
Information Content per bp:1.867
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif2.99%
Number of Background Sequences with motif86.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets103.1 +/- 52.9bp
Average Position of motif in Background92.8 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGTCAAGATT
---CAAGCTT
 A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAAGATT
ACGTCA-----
 A C G T A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAAGATT--
NNTNNCAATATTAG
 A C G T A C G T A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAAGATT--
NNTNNCAATATTAG
 A C G T A C G T A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T A C G T A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTCAAGATT---
TTGCCCGGATTAGG
 A C G T A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGTCAAGATT--
----RGGATTAR
 A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGTCAAGATT
TGTCTAGA--
 A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T

MAFF/MA0495.3/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGTCAAGATT-----
AAGTCAGCATTTTTTT
 A C G T A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A T A C G C G A T G T A C C G T A C A T G A G T C C G T A C G A T G C A T G C A T G C A T G C A T G C A T G C A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CGTCAAGATT---
---VRGGATTARN
 A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGTCAAGATT
CGTCTAGACA
 A G T C C T A G A G C T A G T C C G T A C T G A A T C G C G T A A C G T A C G T
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A