Information for 18-CAAGGAAAGT (Motif 27)

A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G
p-value:1e-3
log p-value:-6.951e+00
Information Content per bp:1.964
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets123.3 +/- 42.4bp
Average Position of motif in Background107.3 +/- 68.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CAAGGAAAGT--
-AAGGCAAGTGT
 A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

NFATC4/MA1525.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAAGGAAAGT
AATGGAAAAT
 A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAAGGAAAGT
AATGGAAAAT
 A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGAAAGT
GAAAGTGAAAGT
 A C G T A C G T A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAAGGAAAGT
NNTGGAAANN
 A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAAGGAAAGT
AGAAACGAAAGT
 A C G T A C G T A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

TEAD2/MA1121.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGAAAGT--
GNNTGGAATGTGN
 A C G T A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAAGGAAAGT
AATGGAAAAT
 A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAAGGAAAGT
NATGGAAAAN
 A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAAGGAAAGT--
-CAGGTAAGTAT
 A G T C C G T A G T C A A C T G A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T