Information for 2-ATGCCATCTG (Motif 3)

T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G
Reverse Opposite:
A G T C C T G A C T A G G T C A G A C T C A T G A T C G G A T C C T G A A G C T
p-value:1e-14
log p-value:-3.452e+01
Information Content per bp:1.608
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif29.57%
Number of Background Sequences with motif5670.6
Percentage of Background Sequences with motif12.23%
Average Position of motif in Targets99.2 +/- 61.1bp
Average Position of motif in Background100.4 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:ATGCCATCTG---
NNNCCATCTGTNN
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.84
Offset:2
Orientation:forward strand
Alignment:ATGCCATCTG--
--GCCATCTGTT
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.83
Offset:2
Orientation:forward strand
Alignment:ATGCCATCTG--
--RCCATMTGTT
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:ATGCCATCTG----
-NNCCATCTGTNNN
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.78
Offset:2
Orientation:forward strand
Alignment:ATGCCATCTG--
--ACCATCTGTT
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

MSGN1/MA1524.1/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:forward strand
Alignment:ATGCCATCTG---
-CGCCATATGTCC
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T A C G T
A C G T A T G C T C A G A T G C A T G C C T G A G C A T C G T A A G C T A T C G A C G T A G T C T A G C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:ATGCCATCTG----
--GCCAGCTGBTNB
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:8
Score:0.75
Offset:2
Orientation:forward strand
Alignment:ATGCCATCTG--
--SMCATCTGKH
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T
A C G T A C G T T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--ATGCCATCTG-----
CCNNACCATCTGGCCTN
 A C G T A C G T T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

HAND2/MA1638.1/Jaspar

Match Rank:10
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:ATGCCATCTG--
--NNCATCTGNN
 T C G A G A C T C T A G A T G C G T A C C T G A C A G T G A T C A G C T T C A G A C G T A C G T
A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T