Information for 7-TTGTTAGCCAAT (Motif 7)

A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T
Reverse Opposite:
C T G A A C G T C G A T A C T G A T C G G T A C A C G T C T G A T G C A G T A C C G T A G T C A
p-value:1e-11
log p-value:-2.740e+01
Information Content per bp:1.768
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.32%
Number of Background Sequences with motif47.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets52.4 +/- 17.7bp
Average Position of motif in Background118.8 +/- 50.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTGTTAGCCAAT--
--ACTAGCCAATCA
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T A C G T A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.70
Offset:5
Orientation:forward strand
Alignment:TTGTTAGCCAAT---
-----AGCCAATCGG
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.2/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTGTTAGCCAAT---
---NTGGCCAATGAG
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

NFYC/MA1644.1/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TTGTTAGCCAAT----
-----AGCCAATCAGA
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYA/MA0060.3/Jaspar

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TTGTTAGCCAAT----
-----AACCAATCAGA
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGTTAGCCAAT
--GTTGCGCAAT
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T
A C G T A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTGTTAGCCAAT--
-TATTATGCAATAT
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T A C G T A C G T
A C G T C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTAGCCAAT-
ANANNTGATACCCTATN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTGTTAGCCAAT
---CGTGCCAAG
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

HLF/MA0043.3/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGTTAGCCAAT--
TTGTTATGCAACAA
 A C G T A C G T A C T G A C G T A G C T G T C A C A T G A T G C A G T C C G T A C G T A A G C T A C G T A C G T
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A