Information for 3-TAAATGAG (Motif 8)

A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G
Reverse Opposite:
G T A C G C A T T G A C T C G A G A C T A G C T G C A T T C G A
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.786
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif36.88%
Number of Background Sequences with motif9046.9
Percentage of Background Sequences with motif19.51%
Average Position of motif in Targets109.1 +/- 57.2bp
Average Position of motif in Background100.0 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TAAATGAG--
ATAATGAGGT
 A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G A C G T A C G T
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TAAATGAG--
NTAATGAGCT
 A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G A C G T A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TAAATGAG-----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C G T A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TAAATGAG-----
AAACATAATGAGGTTGC
 A C G T A C G T A C G T A C G T A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGAG
TTTAATGAN
 A C G T A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G
C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

NOTO/MA0710.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGAG-
NNTAATTAGN
 A C G T A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G A C G T
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TAAATGAG
GCTAAACGGT
 A C G T A C G T A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

BARHL1/MA0877.2/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TAAATGAG
CTAAACGG-
 A C G T A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T

LBX1/MA0618.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAAATGAG
TTAATTAG
 A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

HOXC4/MA1504.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TAAATGAG
NTAATGAN
 A G C T C G T A C T G A C T G A A G C T A C T G C G T A A C T G
A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C