Information for 8-CTGCCACATAGT (Motif 9)

T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T
Reverse Opposite:
C G T A T A G C G A C T C G T A C G A T A T C G A C G T C T A G T A C G A T G C C G T A A C T G
p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.791
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.32%
Number of Background Sequences with motif55.3
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets111.0 +/- 59.9bp
Average Position of motif in Background92.8 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGCCACATAGT---
YDGHTACAWTGTADC
 T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGCCACATAGT---
TWGHWACAWTGTWDC
 T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGCCACATAGT
GGTGCCAAGT---
 A C G T T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGCCACATAGT-
-NGCCATATGGTG
 T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T A C G T
A C G T A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGCCACATAGT
TTGCCAAG----
 T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGCCACATAGT
-TGCCAGCB---
 T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T
A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGCCACATAGT
CGTGCCAAG----
 A C G T T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCCACATAGT
-TGTCANYT---
 T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTGCCACATAGT-----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

MXI1/MA1108.2/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTGCCACATAGT
--GACACATGGC
 T A G C A C G T A T C G A T G C A G T C C G T A T A G C C G T A C G A T C T G A A T C G A C G T
A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C