Information for 8-TCCGCGAA (Motif 27)

C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A
Reverse Opposite:
C G A T C G A T G T A C C A T G A T G C A T C G A C T G G T C A
p-value:1e-9
log p-value:-2.201e+01
Information Content per bp:1.615
Number of Target Sequences with motif204.0
Percentage of Target Sequences with motif18.63%
Number of Background Sequences with motif5472.8
Percentage of Background Sequences with motif12.08%
Average Position of motif in Targets96.5 +/- 53.4bp
Average Position of motif in Background100.4 +/- 68.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCCGCGAA
CTTCCNGGAA
 A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

Stat5a/MA1624.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCCGCGAA--
TTTCCAAGAAAT
 A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T A C G T
C G A T G A C T C G A T G T A C G A T C G C T A C T G A A C T G C G T A C T G A G C T A G A C T

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCCGCGAA-
TTTCCAGGAAA
 A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCCGCGAA-
NTTTCTNAGAAA
 A C G T A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Stat5b/MA1625.1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TCCGCGAA---
CATTTCCCAGAAATC
 A C G T A C G T A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T A C G T A C G T
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TCCGCGAA--
NATTTCCNGGAAAT
 A C G T A C G T A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCCGCGAA----
TTTCCAGGAAATGG
 A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T A C G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCCGCGAA--
TTCTTGGAAAN
 A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T A C G T
A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TCCGCGAA-
NTTTCCNGGAAA
 A C G T A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCCGCGAA----
GNNACCGAGAATNNN
 A C G T A C G T A C G T C A G T T G A C T A G C T A C G G T A C C A T G G C T A G C T A A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T