Information for 18-ATTAAACTGC (Motif 28)

C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C
Reverse Opposite:
C A T G A T G C C G T A A T C G A G C T A C G T A G C T C G T A C T G A C G A T
p-value:1e-8
log p-value:-2.045e+01
Information Content per bp:1.826
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif214.4
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets106.0 +/- 51.6bp
Average Position of motif in Background107.8 +/- 72.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATTAAACTGC
ATTAAA----
 C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATTAAACTGC--
--NHAACBGYYV
 C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAACTGC
NTAATTAATAT--
 A C G T A C G T A C G T C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATTAAACTGC
NGCAATTAAA----
 A C G T A C G T A C G T A C G T C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATTAAACTGC-
AACCGTTAAACGGTC
 A C G T A C G T A C G T A C G T C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATTAAACTGC
CTAATTAA-----
 A C G T A C G T A C G T C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTAAACTGC
GTAATTAA-----
 A C G T A C G T A C G T C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATTAAACTGC-
-ACCAACTGTC
 C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C A C G T
A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

LMX1B/MA0703.2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAACTGC
TTAATTAAANT--
 A C G T A C G T A C G T C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C
C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T A C G T A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATTAAACTGC
CTCATTAAA----
 A C G T A C G T A C G T C G T A G A C T C G A T C T G A G T C A C T G A T A G C C G A T A T C G G T A C
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T A C G T A C G T A C G T