Information for 3-TYCGCATA (Motif 3)

C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A
Reverse Opposite:
C G A T C G T A A C G T A C T G A G T C A C T G T C A G C G T A
p-value:1e-21
log p-value:-4.981e+01
Information Content per bp:1.752
Number of Target Sequences with motif178.0
Percentage of Target Sequences with motif16.26%
Number of Background Sequences with motif3385.5
Percentage of Background Sequences with motif7.47%
Average Position of motif in Targets99.4 +/- 54.0bp
Average Position of motif in Background101.3 +/- 71.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPG/MA0838.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TYCGCATA
ATTGCGCAAT
 A C G T A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TYCGCATA
TWVGGTCCGC---
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TYCGCATA
ATTTGCATA
 A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TYCGCATA-
ATTTGCATAA
 A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A A C G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TYCGCATA
GATTTGCATA
 A C G T A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

CEBPB/MA0466.2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TYCGCATA
ATTGCGCAAT
 A C G T A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TYCGCATA-
TTCCCCCTAC
 A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A A C G T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

HINFP/MA0131.2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TYCGCATA
CAACGTCCGCGG-
 A C G T A C G T A C G T A C G T A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TYCGCATA--
NNATTTGCATATN
 A C G T A C G T A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A A C G T A C G T
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

POU5F1/MA1115.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TYCGCATA-
NATTTGCATNN
 A C G T A C G T C G A T A G T C A G T C A C T G A G T C G T C A C G A T G C T A A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T