Information for 20-RCCACAATAC (Motif 30)

C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
Reverse Opposite:
C T A G C G A T T C G A C A G T G C A T C T A G G C A T C A T G A C T G G A T C
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.718
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif93.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets99.2 +/- 65.6bp
Average Position of motif in Background105.5 +/- 51.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---RCCACAATAC
NWAACCACADNN-
 A C G T A C G T A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--RCCACAATAC
AAACCACAGAN-
 A C G T A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---RCCACAATAC
NAAACCACAG---
 A C G T A C G T A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--RCCACAATAC
AAACCACANN--
 A C G T A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---RCCACAATAC
AAAACCTCAAAT-
 A C G T A C G T A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-RCCACAATAC
ATCCAC-----
 A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:RCCACAATAC
--CACAATGC
 C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RCCACAATAC
AAACCGCAA---
 A C G T A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RCCACAATAC----
TACCCACAATGCATTG
 A C G T A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C A C G T A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--RCCACAATAC
AAACCACAGC--
 A C G T A C G T C T A G T G A C G T A C C G T A A G T C C G T A G T C A A G C T G C T A A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T