Information for 11-CTATCACG (Motif 31)

A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G
Reverse Opposite:
A T G C C T A G C G A T A C T G T C G A G A C T T C G A C T A G
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.793
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif5.48%
Number of Background Sequences with motif1068.8
Percentage of Background Sequences with motif2.36%
Average Position of motif in Targets90.3 +/- 52.0bp
Average Position of motif in Background98.0 +/- 67.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTATCACG-
-AGTCACGC
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CTATCACG----
NHRTCACGACDN
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T A C G T A C G T A C G T
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

TFE3/MA0831.2/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTATCACG--
--GTCACGTG
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G

MLX/MA0663.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTATCACG----
--ATCACGTGAT
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTATCACG---
-GGTCACGTGC
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T A C G T A C G T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTATCACG----
--ATCACGTGAC
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C

MLXIPL/MA0664.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTATCACG----
--ATCACGTGAT
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTATCACG
CCAATCAA-
 A C G T A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTATCACG---
---GCACGTNC
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

ARNT2/MA1464.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTATCACG----
--GTCACGTGCC
 A G T C A G C T C T G A A G C T A G T C C G T A A G T C T A C G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C G A T T G A C C T G A A G T C C T A G G A C T C A T G G T A C A T G C