Information for 12-AAAACACG (Motif 33)

C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G
Reverse Opposite:
A G T C T A C G A C G T A C T G A C G T A C G T A G C T A G C T
p-value:1e-8
log p-value:-1.848e+01
Information Content per bp:1.814
Number of Target Sequences with motif109.0
Percentage of Target Sequences with motif9.95%
Number of Background Sequences with motif2544.6
Percentage of Background Sequences with motif5.62%
Average Position of motif in Targets100.3 +/- 56.6bp
Average Position of motif in Background98.8 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAACACG----
GCAAAACATTACTA
 A C G T A C G T C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Foxo1/MA0480.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AAAACACG-
TGTAAACAGGA
 A C G T A C G T C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAAACACG--
AAACCACANN
 C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

POL007.1_BREd/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAAACACG
NANANAC-
 C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAAACACG----
--AACACGTGTT
 C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

FOXK1/MA0852.2/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAAACACG--
AATGTAAACAAGGC
 A C G T A C G T A C G T A C G T C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T A C G T
C G T A C T G A C A G T T C A G C G A T T G C A T G C A G T C A A G T C G T C A T C G A T A C G T A C G T G A C

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAACACG----
NHRTCACGACDN
 C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T A C G T A C G T A C G T
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AAAACACG---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

GRHL2/MA1105.2/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAACACG----
AAAACAGGTTTT
 C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T A C G T A C G T A C G T
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAAACACG-
ATGTAAACADGS
 A C G T A C G T A C G T C T G A C T G A T G C A T G C A A G T C C G T A A T G C C T A G A C G T
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C