Information for 13-CTAACGGC (Motif 34)

A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C
Reverse Opposite:
T C A G A T G C G A T C A T C G C G A T A G C T G T C A C T A G
p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.830
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif7.21%
Number of Background Sequences with motif1677.1
Percentage of Background Sequences with motif3.70%
Average Position of motif in Targets91.8 +/- 60.9bp
Average Position of motif in Background98.9 +/- 64.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTAACGGC
CTAATKGV
 A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Isl1/MA1608.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CTAACGGC-
NNCTAATGGNN
 A C G T A C G T A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

OVOL2/MA1545.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CTAACGGC--
NNNNTAACGGTNN
 A C G T A C G T A C G T A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C A C G T A C G T
T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CTAACGGC-
-YAACBGCC
 A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C A C G T
A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTAACGGC--
NHAACBGYYV
 A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C A C G T A C G T
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTAACGGC--
CCAACTGCCA
 A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C A C G T A C G T
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

OVOL1/MA1544.1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTAACGGC---
NANATAACGGTTTT
 A C G T A C G T A C G T A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C A C G T A C G T A C G T
T A G C C T G A T C G A T C G A A C G T C G T A G T C A G T A C A C T G A C T G C G A T G C A T G A C T G C A T

HOXA4/MA1496.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAACGGC
NTAATGAC
 A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C
A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAACGGC--
NTAATKGTTT
 A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C A C G T A C G T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

HOXB6/MA1500.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTAACGGC
TTAATTAC
 A G T C A C G T C T G A C G T A T A G C C T A G A T C G A G T C
A G C T A G C T G T C A C G T A A C G T A C G T C T G A A G T C